Koki deep biography templates

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    Open Access

    Peer-reviewed

    • Shogo Suga ,
    • Koki Nakamura ,
    • Yu Nakanishi,
    • Bruno M. Humbel,
    • Hiroki Kawai ,
    • Yusuke Hirabayashi
    • Shogo Suga, 
    • Koki Nakamura, 
    • Yu Nakanishi, 
    • Bruno M. Humbel, 
    • Hiroki Kawai, 
    • Yusuke Hirabayashi

    x

    Abstract

    The convolution of membranes called cristae is a critical structural and functional feature of mitochondria. Crista structure is highly diverse between different cell types, reflecting their role in metabolic adaptation. However, their precise three-dimensional (3D) arrangement requires volumetric analysis of serial electron microscopy and has therefore been limiting for unbiased quantitative assessment. Here, we developed a novel, publicly available, deep learning (DL)-based image analysis platform called Python-based human-in-the-loop workflow (PHILOW) implemented with a human-in-the-loop (HITL) algorithm. Analysis of dense, large, and isotropic volumes of focused ion beam-scanning electron microscopy (FIB-SEM) using PHILOW reveals the complex 3D nanostructure of both inner and outer mitochondrial membranes and provides deep, quantitative, structural features of cristae in a large number of individual mitochondria. This nanometer-scale analysis in micrometer-scale cellul

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